Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| HNE_0043 | HNE_3000 | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Putative membrane protein; Identified by similarity to GB:AAK22196.1. | 0.780 |
| HNE_0043 | HNE_3395 | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366. | 0.908 |
| HNE_0699 | HNE_0702 | Bacterial lipid A biosynthesis acyltransferase; Identified by match to protein family HMM PF03279. | Conserved hypothetical protein; Identified by similarity to GB:AAN33418.1; match to protein family HMM PF04028. | 0.992 |
| HNE_0699 | HNE_1780 | Bacterial lipid A biosynthesis acyltransferase; Identified by match to protein family HMM PF03279. | Conserved hypothetical protein; Identified by match to protein family HMM PF06230. | 0.761 |
| HNE_0699 | HNE_2274 | Bacterial lipid A biosynthesis acyltransferase; Identified by match to protein family HMM PF03279. | Putative permease; Identified by match to protein family HMM PF03739. | 0.634 |
| HNE_0699 | HNE_3395 | Bacterial lipid A biosynthesis acyltransferase; Identified by match to protein family HMM PF03279. | Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366. | 0.544 |
| HNE_0702 | HNE_0699 | Conserved hypothetical protein; Identified by similarity to GB:AAN33418.1; match to protein family HMM PF04028. | Bacterial lipid A biosynthesis acyltransferase; Identified by match to protein family HMM PF03279. | 0.992 |
| HNE_0702 | HNE_1780 | Conserved hypothetical protein; Identified by similarity to GB:AAN33418.1; match to protein family HMM PF04028. | Conserved hypothetical protein; Identified by match to protein family HMM PF06230. | 0.703 |
| HNE_0702 | HNE_2274 | Conserved hypothetical protein; Identified by similarity to GB:AAN33418.1; match to protein family HMM PF04028. | Putative permease; Identified by match to protein family HMM PF03739. | 0.590 |
| HNE_0702 | HNE_3000 | Conserved hypothetical protein; Identified by similarity to GB:AAN33418.1; match to protein family HMM PF04028. | Putative membrane protein; Identified by similarity to GB:AAK22196.1. | 0.416 |
| HNE_0702 | HNE_3395 | Conserved hypothetical protein; Identified by similarity to GB:AAN33418.1; match to protein family HMM PF04028. | Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366. | 0.552 |
| HNE_0728 | HNE_3195 | Conserved hypothetical protein; Identified by similarity to GB:AAK22932.1. | Putative O-antigen polymerase; Identified by match to protein family HMM PF04932. | 0.507 |
| HNE_0728 | HNE_3395 | Conserved hypothetical protein; Identified by similarity to GB:AAK22932.1. | Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366. | 0.471 |
| HNE_1189 | HNE_3000 | ATP-dependent AMP-binding enzyme family protein; Identified by similarity to SP:P39847; match to protein family HMM PF00296; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00551. | Putative membrane protein; Identified by similarity to GB:AAK22196.1. | 0.463 |
| HNE_1189 | HNE_3395 | ATP-dependent AMP-binding enzyme family protein; Identified by similarity to SP:P39847; match to protein family HMM PF00296; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00551. | Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366. | 0.463 |
| HNE_1780 | HNE_0699 | Conserved hypothetical protein; Identified by match to protein family HMM PF06230. | Bacterial lipid A biosynthesis acyltransferase; Identified by match to protein family HMM PF03279. | 0.761 |
| HNE_1780 | HNE_0702 | Conserved hypothetical protein; Identified by match to protein family HMM PF06230. | Conserved hypothetical protein; Identified by similarity to GB:AAN33418.1; match to protein family HMM PF04028. | 0.703 |
| HNE_1780 | HNE_2274 | Conserved hypothetical protein; Identified by match to protein family HMM PF06230. | Putative permease; Identified by match to protein family HMM PF03739. | 0.644 |
| HNE_1780 | HNE_3395 | Conserved hypothetical protein; Identified by match to protein family HMM PF06230. | Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366. | 0.539 |
| HNE_2274 | HNE_0699 | Putative permease; Identified by match to protein family HMM PF03739. | Bacterial lipid A biosynthesis acyltransferase; Identified by match to protein family HMM PF03279. | 0.634 |
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