STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NE0902Periplasmic component of the Tol biopolymer transport system. (369 aa)    
Predicted Functional Partners:
NE0901
PDZ domain (also known as DHR or GLGF).
  
 0.865
pal
Bacterial outer membrane protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
 
 0.615
NE0783
Hypothetical protein.
  
 
 
 0.579
NE1203
Similar to (AF145800) immunogenic 75 kDa protein PG4 [Porphyromonas gingivalis], evalue=8.00e-07, 24% identity.
 
 
 0.549
NE1761
Hypothetical protein; InterPro IPR001687.
 
 
 0.544
NE0900
Hypothetical protein.
 
    0.542
cpoB
TPR repeat; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
  
  
 0.506
NE2563
General diffusion Gram-negative porins.
  
 
 0.499
amyA
Glycosyl hydrolase family 57.
  
     0.482
NE0564
Conserved hypothetical protein; 4 probable transmembrane helices predicted by TMHMM2.0.
 
 
   0.478
Your Current Organism:
Nitrosomonas europaea
NCBI taxonomy Id: 228410
Other names: N. europaea ATCC 19718, Nitrosomonas europaea ATCC 19718, Nitrosomonas europaea str. ATCC 19718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.