Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NE0896 | hipA | NE0896 | NE1310 | Helix-turn-helix motif. | Possible HipA protein. | 0.614 |
| NE1311 | hipA | NE1311 | NE1310 | Helix-turn-helix motif. | Possible HipA protein. | 0.949 |
| NE1375 | hipA | NE1375 | NE1310 | Helix-turn-helix motif. | Possible HipA protein. | 0.531 |
| NE1519 | hipA | NE1519 | NE1310 | Conserved hypothetical protein; COGs COG3620. | Possible HipA protein. | 0.614 |
| fis | hipA | NE0875 | NE1310 | Similar to (NC_003295) PROBABLE FACTOR-FOR-INVERSION-STIMULATION TRANSCRIPTION REGULATOR PROTEIN [Ralstonia solanacearum] evalue=3.00e-17, 50% identity; Belongs to the transcriptional regulatory Fis family. | Possible HipA protein. | 0.400 |
| hipA | NE0896 | NE1310 | NE0896 | Possible HipA protein. | Helix-turn-helix motif. | 0.614 |
| hipA | NE1311 | NE1310 | NE1311 | Possible HipA protein. | Helix-turn-helix motif. | 0.949 |
| hipA | NE1375 | NE1310 | NE1375 | Possible HipA protein. | Helix-turn-helix motif. | 0.531 |
| hipA | NE1519 | NE1310 | NE1519 | Possible HipA protein. | Conserved hypothetical protein; COGs COG3620. | 0.614 |
| hipA | fis | NE1310 | NE0875 | Possible HipA protein. | Similar to (NC_003295) PROBABLE FACTOR-FOR-INVERSION-STIMULATION TRANSCRIPTION REGULATOR PROTEIN [Ralstonia solanacearum] evalue=3.00e-17, 50% identity; Belongs to the transcriptional regulatory Fis family. | 0.400 |
| hipA | prfB | NE1310 | NE1229 | Possible HipA protein. | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.737 |
| hipA | sinR | NE1310 | NE2537 | Possible HipA protein. | Helix-turn-helix motif. | 0.625 |
| hipA | vapC-3 | NE1310 | NE0553 | Possible HipA protein. | PIN (PilT N terminus) domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.453 |
| prfB | hipA | NE1229 | NE1310 | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Possible HipA protein. | 0.737 |
| sinR | hipA | NE2537 | NE1310 | Helix-turn-helix motif. | Possible HipA protein. | 0.625 |
| vapC-3 | hipA | NE0553 | NE1310 | PIN (PilT N terminus) domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Possible HipA protein. | 0.453 |