STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NE1799Conserved hypothetical protein. (322 aa)    
Predicted Functional Partners:
NE1798
Glycosyl transferases group 1.
 
    0.968
NE1797
Conserved hypothetical protein.
 
     0.931
NE1800
Polysaccharide deacetylase.
 
  
 0.926
NE1802
Hypothetical protein.
 
     0.918
NE1801
ATP/GTP-binding site motif A (P-loop):AAA ATPase superfamily.
 
    0.906
yveL
Possible similar to capsular polysaccharide biosynthesis.
 
    0.893
NE1804
Chain length determinant protein.
 
    0.891
NE1796
Glycosyl transferases group 1.
 
     0.884
wza
Putative polysaccharide export protein, outer membrane.
 
     0.868
NE1444
TPR repeat.
 
     0.847
Your Current Organism:
Nitrosomonas europaea
NCBI taxonomy Id: 228410
Other names: N. europaea ATCC 19718, Nitrosomonas europaea ATCC 19718, Nitrosomonas europaea str. ATCC 19718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.