Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NE0049 | NE1250 | NE0049 | NE1250 | Sensory transduction histidine kinases. | Transposase; This is the remnant of a transposon. | 0.989 |
NE0049 | NE1397 | NE0049 | NE1397 | Sensory transduction histidine kinases. | Methyl-accepting chemotaxis protein; Dead gene due to framehsift; the other part of the gene is NE1395. | 0.879 |
NE0049 | NE1863 | NE0049 | NE1863 | Sensory transduction histidine kinases. | Probable chemotaxis transducer. | 0.983 |
NE0049 | NE1864 | NE0049 | NE1864 | Sensory transduction histidine kinases. | HAMP domain:Bacterial chemotaxis sensory transducer. | 0.968 |
NE0049 | cheA | NE0049 | NE1866 | Sensory transduction histidine kinases. | Similar to (NC_003296) PROBABLE CHEMOTAXIS SENSOR HISTIDINE KINASE TRANSCRIPTION REGULATOR PROTEIN [Ralstonia solanacearum] evalue=0.00e+00, 51% identity. | 0.887 |
NE0049 | cheB | NE0049 | NE1859 | Sensory transduction histidine kinases. | CheB methylesterase:Response regulator receiver domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.860 |
NE0049 | cheD | NE0049 | NE1860 | Sensory transduction histidine kinases. | Conserved hypothetical protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.498 |
NE0049 | cheR | NE0049 | NE1861 | Sensory transduction histidine kinases. | CheR-type MCP methyl-transferase:Generic methyl-transferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.779 |
NE0049 | cheW | NE0049 | NE1865 | Sensory transduction histidine kinases. | CheW-like domain. | 0.878 |
NE0049 | cheY | NE0049 | NE1923 | Sensory transduction histidine kinases. | Response regulator receiver domain. | 0.979 |
NE1250 | NE0049 | NE1250 | NE0049 | Transposase; This is the remnant of a transposon. | Sensory transduction histidine kinases. | 0.989 |
NE1250 | NE1397 | NE1250 | NE1397 | Transposase; This is the remnant of a transposon. | Methyl-accepting chemotaxis protein; Dead gene due to framehsift; the other part of the gene is NE1395. | 0.998 |
NE1250 | NE1863 | NE1250 | NE1863 | Transposase; This is the remnant of a transposon. | Probable chemotaxis transducer. | 0.997 |
NE1250 | NE1864 | NE1250 | NE1864 | Transposase; This is the remnant of a transposon. | HAMP domain:Bacterial chemotaxis sensory transducer. | 0.995 |
NE1250 | cheA | NE1250 | NE1866 | Transposase; This is the remnant of a transposon. | Similar to (NC_003296) PROBABLE CHEMOTAXIS SENSOR HISTIDINE KINASE TRANSCRIPTION REGULATOR PROTEIN [Ralstonia solanacearum] evalue=0.00e+00, 51% identity. | 0.713 |
NE1250 | cheB | NE1250 | NE1859 | Transposase; This is the remnant of a transposon. | CheB methylesterase:Response regulator receiver domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.998 |
NE1250 | cheD | NE1250 | NE1860 | Transposase; This is the remnant of a transposon. | Conserved hypothetical protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.973 |
NE1250 | cheR | NE1250 | NE1861 | Transposase; This is the remnant of a transposon. | CheR-type MCP methyl-transferase:Generic methyl-transferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.972 |
NE1250 | cheW | NE1250 | NE1865 | Transposase; This is the remnant of a transposon. | CheW-like domain. | 0.998 |
NE1250 | cheY | NE1250 | NE1923 | Transposase; This is the remnant of a transposon. | Response regulator receiver domain. | 0.766 |
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