Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NE0864 | NE2464 | NE0864 | NE2464 | Conserved hypothetical protein; COGs COG3635. | Integral membrane protein, DUF6. | 0.407 |
NE0864 | NE2466 | NE0864 | NE2466 | Conserved hypothetical protein; COGs COG3635. | Putative lipoprotein. | 0.579 |
NE1536 | NE1571 | NE1536 | NE1571 | TonB-dependent receptor protein. | Hypothetical protein. | 0.724 |
NE1536 | NE1841 | NE1536 | NE1841 | TonB-dependent receptor protein. | Hypothetical protein; InterPro IPR000345. | 0.670 |
NE1536 | NE2464 | NE1536 | NE2464 | TonB-dependent receptor protein. | Integral membrane protein, DUF6. | 0.667 |
NE1571 | NE1536 | NE1571 | NE1536 | Hypothetical protein. | TonB-dependent receptor protein. | 0.724 |
NE1571 | NE1841 | NE1571 | NE1841 | Hypothetical protein. | Hypothetical protein; InterPro IPR000345. | 0.587 |
NE1571 | NE2464 | NE1571 | NE2464 | Hypothetical protein. | Integral membrane protein, DUF6. | 0.424 |
NE1571 | rkpA | NE1571 | NE1389 | Hypothetical protein. | Similar to (AF285636) putative type I polyketide synthase WcbR [Burkholderia mallei], evalue=0.00e+00, 41% identity. | 0.540 |
NE1841 | NE1536 | NE1841 | NE1536 | Hypothetical protein; InterPro IPR000345. | TonB-dependent receptor protein. | 0.670 |
NE1841 | NE1571 | NE1841 | NE1571 | Hypothetical protein; InterPro IPR000345. | Hypothetical protein. | 0.587 |
NE1841 | NE2464 | NE1841 | NE2464 | Hypothetical protein; InterPro IPR000345. | Integral membrane protein, DUF6. | 0.464 |
NE2464 | NE0864 | NE2464 | NE0864 | Integral membrane protein, DUF6. | Conserved hypothetical protein; COGs COG3635. | 0.407 |
NE2464 | NE1536 | NE2464 | NE1536 | Integral membrane protein, DUF6. | TonB-dependent receptor protein. | 0.667 |
NE2464 | NE1571 | NE2464 | NE1571 | Integral membrane protein, DUF6. | Hypothetical protein. | 0.424 |
NE2464 | NE1841 | NE2464 | NE1841 | Integral membrane protein, DUF6. | Hypothetical protein; InterPro IPR000345. | 0.464 |
NE2464 | NE2465 | NE2464 | NE2465 | Integral membrane protein, DUF6. | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.495 |
NE2464 | NE2466 | NE2464 | NE2466 | Integral membrane protein, DUF6. | Putative lipoprotein. | 0.617 |
NE2464 | dapC | NE2464 | NE2463 | Integral membrane protein, DUF6. | Aminotransferases class-I. | 0.631 |
NE2464 | dapD | NE2464 | NE2462 | Integral membrane protein, DUF6. | Bacterial transferase hexapeptide repeat; Belongs to the transferase hexapeptide repeat family. | 0.598 |
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