STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NE2490Putative MinD-related protein. (297 aa)    
Predicted Functional Partners:
flhF
Possible flhF; flagellar biosynthetic protein FlhF.
 
 
 0.997
fliA
Sigma-70 factor family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
 
  
 0.968
flhA
Bacterial export FHIPEP family; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.959
flhB
FlhB HrpN YscU SpaS Family; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
 
 
 0.876
fliG
Flagellar motor switch protein FliG.
 
  
 0.855
fliM
Flagellar motor switch protein FliM.
 
  
 0.770
NE0566
Domain of unknown function 2:Response regulator receiver domain.
  
 
 0.725
fliN
Possible flagellar motor switch FliN.
 
  
 0.695
NE2081
Similar to (NC_002505) sigma-54 dependent response regulator [Vibrio cholerae], evalue=1.00e-116, 52% identity.
 
 
 0.684
NtrX
NtrX; Similar to (NC_003112) nitrogen assimilation regulatory protein NtrX [Neisseria meningitidis MC58], evalue=2.00e-95, 46% identity.
  
 
 0.638
Your Current Organism:
Nitrosomonas europaea
NCBI taxonomy Id: 228410
Other names: N. europaea ATCC 19718, Nitrosomonas europaea ATCC 19718, Nitrosomonas europaea str. ATCC 19718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.