STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NE2518Patatin. (315 aa)    
Predicted Functional Partners:
NE2517
Hypothetical protein.
 
    0.808
NE2516
Transposase IS911 HTH and LZ region.
       0.746
NE2515
Integrase, catalytic core.
       0.590
NE2520
ATP-dependent DNA helicase RecQ.
  
    0.448
NE2519
Conserved hypothetical protein; COGs COG2378.
  
    0.444
NE2521
Conserved hypothetical protein; InterPro IPR002086 COGs COG0758.
  
    0.434
NE1049
Ankyrin-repeat.
  
     0.415
Your Current Organism:
Nitrosomonas europaea
NCBI taxonomy Id: 228410
Other names: N. europaea ATCC 19718, Nitrosomonas europaea ATCC 19718, Nitrosomonas europaea str. ATCC 19718
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.