STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019705_02142Unannotated protein. (308 aa)    
Predicted Functional Partners:
GCA_002019705_02141
Unannotated protein.
 
 
 0.984
GCA_002019705_02226
Unannotated protein.
 
 
 0.948
GCA_002019705_02140
Unannotated protein.
 
  
 0.857
GCA_002019705_04828
Unannotated protein.
    
 0.825
GCA_002019705_02229
Unannotated protein.
 
  
 0.818
GCA_002019705_01848
Unannotated protein.
  
 
 0.785
GCA_002019705_02143
Unannotated protein.
 
     0.771
GCA_002019705_02961
Unannotated protein.
   
 
 0.740
GCA_002019705_00312
Unannotated protein.
    
  0.720
GCA_002019705_04172
Unannotated protein.
 
  
 0.720
Your Current Organism:
Bacillus patagoniensis
NCBI taxonomy Id: 228576
Other names: ATCC BAA-965, B. patagoniensis, Bacillus patagoniensis Olivera et al. 2005, Bacillus sp. PAT 05, DSM 16117, strain PAT 05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.