STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019705_03046Unannotated protein. (536 aa)    
Predicted Functional Partners:
GCA_002019705_03047
Unannotated protein.
  
    0.800
GCA_002019705_03048
Unannotated protein.
  
    0.788
GCA_002019705_03049
Unannotated protein.
       0.712
GCA_002019705_03105
Unannotated protein.
  
     0.639
GCA_002019705_01709
Unannotated protein.
  
     0.638
GCA_002019705_01739
Unannotated protein.
  
     0.637
GCA_002019705_03045
Unannotated protein.
       0.543
GCA_002019705_01701
Unannotated protein.
  
     0.518
GCA_002019705_03044
Unannotated protein.
       0.468
GCA_002019705_01301
Unannotated protein.
  
    0.459
Your Current Organism:
Bacillus patagoniensis
NCBI taxonomy Id: 228576
Other names: ATCC BAA-965, B. patagoniensis, Bacillus patagoniensis Olivera et al. 2005, Bacillus sp. PAT 05, DSM 16117, strain PAT 05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.