STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019705_04348Unannotated protein. (196 aa)    
Predicted Functional Partners:
GCA_002019705_04347
Unannotated protein.
 0.999
GCA_002019705_03269
Unannotated protein.
    
 0.775
GCA_002019705_02743
Unannotated protein.
    
 0.705
GCA_002019705_02684
Unannotated protein.
    
  0.690
GCA_002019705_00985
Unannotated protein.
    
  0.679
GCA_002019705_01612
Unannotated protein.
    
  0.674
GCA_002019705_04346
Unannotated protein.
  
    0.564
GCA_002019705_04280
Unannotated protein.
    
  0.542
GCA_002019705_03461
Unannotated protein.
     
 0.528
GCA_002019705_04521
Unannotated protein.
     
 0.528
Your Current Organism:
Bacillus patagoniensis
NCBI taxonomy Id: 228576
Other names: ATCC BAA-965, B. patagoniensis, Bacillus patagoniensis Olivera et al. 2005, Bacillus sp. PAT 05, DSM 16117, strain PAT 05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.