Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NEQ039 | NEQ098 | NEQ039 | NEQ098 | NEQ039; Transcription initiation factor TFIID [Methanococcus jannaschii]; COG2101: Transcription initiation factor TFIID (TATA-binding protein); IPR000814: Transcription factor TFIID. | NEQ098; Predicted transcription regulator; COG1378: Predicted transcriptional regulators; IPR000463: Cytosolic fatty-acid binding protein; IPR002831: Protein of unknown function DUF118. | 0.461 |
NEQ098 | NEQ039 | NEQ098 | NEQ039 | NEQ098; Predicted transcription regulator; COG1378: Predicted transcriptional regulators; IPR000463: Cytosolic fatty-acid binding protein; IPR002831: Protein of unknown function DUF118. | NEQ039; Transcription initiation factor TFIID [Methanococcus jannaschii]; COG2101: Transcription initiation factor TFIID (TATA-binding protein); IPR000814: Transcription factor TFIID. | 0.461 |
NEQ098 | NEQ099 | NEQ098 | NEQ099 | NEQ098; Predicted transcription regulator; COG1378: Predicted transcriptional regulators; IPR000463: Cytosolic fatty-acid binding protein; IPR002831: Protein of unknown function DUF118. | NEQ099. | 0.545 |
NEQ098 | NEQ100 | NEQ098 | NEQ100 | NEQ098; Predicted transcription regulator; COG1378: Predicted transcriptional regulators; IPR000463: Cytosolic fatty-acid binding protein; IPR002831: Protein of unknown function DUF118. | NEQ100. | 0.545 |
NEQ098 | leuS | NEQ098 | NEQ239 | NEQ098; Predicted transcription regulator; COG1378: Predicted transcriptional regulators; IPR000463: Cytosolic fatty-acid binding protein; IPR002831: Protein of unknown function DUF118. | NEQ239; Isoleucine tRNA synthetase [Methanococcus jannaschii]; COG0495: Leucyl-tRNA synthetase; COG0143: Methionyl-tRNA synthetase; IPR002300: t-RNA synthetase, class Ia; IPR002308: Cysteinyl-tRNA synthetase; IPR001412: Aminoacyl-transfer RNA synthetases class-I; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.407 |
NEQ099 | NEQ098 | NEQ099 | NEQ098 | NEQ099. | NEQ098; Predicted transcription regulator; COG1378: Predicted transcriptional regulators; IPR000463: Cytosolic fatty-acid binding protein; IPR002831: Protein of unknown function DUF118. | 0.545 |
NEQ099 | NEQ100 | NEQ099 | NEQ100 | NEQ099. | NEQ100. | 0.773 |
NEQ100 | NEQ098 | NEQ100 | NEQ098 | NEQ100. | NEQ098; Predicted transcription regulator; COG1378: Predicted transcriptional regulators; IPR000463: Cytosolic fatty-acid binding protein; IPR002831: Protein of unknown function DUF118. | 0.545 |
NEQ100 | NEQ099 | NEQ100 | NEQ099 | NEQ100. | NEQ099. | 0.773 |
leuS | NEQ098 | NEQ239 | NEQ098 | NEQ239; Isoleucine tRNA synthetase [Methanococcus jannaschii]; COG0495: Leucyl-tRNA synthetase; COG0143: Methionyl-tRNA synthetase; IPR002300: t-RNA synthetase, class Ia; IPR002308: Cysteinyl-tRNA synthetase; IPR001412: Aminoacyl-transfer RNA synthetases class-I; Belongs to the class-I aminoacyl-tRNA synthetase family. | NEQ098; Predicted transcription regulator; COG1378: Predicted transcriptional regulators; IPR000463: Cytosolic fatty-acid binding protein; IPR002831: Protein of unknown function DUF118. | 0.407 |