STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEQ162NEQ162; Conserved hypothetical protein [aquifex aeolicus]; COG0628: Predicted permease; PS50324: SER_RICH; IPR003015: Myc-type, helix-loop-helix dimerization domain; IPR002549: Domain of unknown function DUF20. (327 aa)    
Predicted Functional Partners:
NEQ160
NEQ160.
       0.773
NEQ159
NEQ159; Phosphatidylethanolamine binding protein [Sulfolobus tokodaii]; COG1881: Phospholipid-binding protein; IPR003015: Myc-type, helix-loop-helix dimerization domain; IPR001858: Phosphatidylethanolamine-binding protein family.
       0.595
Your Current Organism:
Nanoarchaeum equitans
NCBI taxonomy Id: 228908
Other names: Microarchaeum sp. Kin4-M, N. equitans Kin4-M, Nanoarchaeum equitans Kin4-M, Nanoarchaeum equitans str. Kin4-M
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