STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK30025.1Hypothetical protein. (584 aa)    
Predicted Functional Partners:
SEK29909.1
N-terminal double-transmembrane domain-containing protein.
 
     0.951
SEK29962.1
Hypothetical protein.
 
     0.951
SEK29855.1
Protein of unknown function DUF58.
 
     0.946
SEK29737.1
Protein of unknown function.
 
     0.892
SEK29652.1
Predicted Zn-dependent protease or its inactivated homolog.
 
     0.863
SEK29614.1
TldD protein.
 
     0.854
SEK29792.1
MoxR-like ATPase.
 
     0.620
SEL55635.1
Stress responsive A/B Barrel Domain.
  
     0.549
SEK82880.1
Iron complex outermembrane recepter protein.
  
     0.503
SEK82924.1
Starch-binding associating with outer membrane.
  
     0.477
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.