STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK33187.1Arylsulfatase. (520 aa)    
Predicted Functional Partners:
SEK33284.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
 
   0.890
SEK33236.1
Beta-galactosidase.
 
  0.683
SEL21510.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
  
 
   0.651
SEK21004.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
  
 
   0.627
SEL72759.1
Arylsulfatase A.
 
  
 
0.574
SEK77866.1
Protein involved in gliding motility GldK.
  
 
   0.554
SEK33139.1
Amidohydrolase.
       0.526
SEL57092.1
Arylsulfatase.
 
  
 
0.479
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.478
SEK47600.1
RNA polymerase Rpb6.
    
   0.475
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.