STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK37163.1Nitrilase. (321 aa)    
Predicted Functional Partners:
SEK92117.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.948
SEL29312.1
Glutamine synthetase.
    
 0.945
SEK93987.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
   
  0.942
SEK97680.1
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.874
SEM16083.1
Glutamate synthase (NADH) large subunit.
    
  0.874
SEK74559.1
4-hydroxyphenylpyruvate dioxygenase.
   
 0.870
SEM03941.1
Amidase.
 
  
 0.870
SEM09084.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
   
  0.870
SEM16116.1
Glutamate synthase (NADH) small subunit.
  
  0.867
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
    
  0.862
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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