STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK40121.1Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family. (193 aa)    
Predicted Functional Partners:
SEK40163.1
PKD domain-containing protein.
       0.535
SEK40073.1
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.488
SEL49599.1
Glycine dehydrogenase; Belongs to the GcvP family.
   
 
  0.463
SEK56064.1
Dihydrofolate reductase.
  
  
  0.437
SEK40007.1
Amidohydrolase family protein.
       0.428
SEK39960.1
Imidazolonepropionase.
       0.418
SEL19073.1
TfoX N-terminal domain-containing protein.
  
     0.400
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.