STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK40441.1Zn-dependent amino-or carboxypeptidase, M28 family. (443 aa)    
Predicted Functional Partners:
SEK40370.1
Peptidase family M1.
   
   0.666
SEK40601.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
    
  0.627
SEL78604.1
NRAMP (natural resistance-associated macrophage protein) metal ion transporters.
  
     0.571
SEL75191.1
Protein of unknown function.
  
     0.570
SEK40550.1
Hypothetical protein.
 
     0.548
SEM04872.1
S1/P1 Nuclease.
  
     0.469
SEK48694.1
Histidine phosphatase superfamily (branch 1).
  
    0.439
SEK40494.1
Predicted arabinose efflux permease, MFS family.
       0.431
SEK40322.1
Protein of unknown function.
       0.428
SEK48949.1
Hypothetical protein.
  
 
   0.416
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.