STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK55296.1DtxR family transcriptional regulator, Mn-dependent transcriptional regulator. (340 aa)    
Predicted Functional Partners:
SEK55162.1
Ferrous iron transport protein B.
 
  
 0.982
SEK55208.1
Ferrous iron transport protein B.
 
  
 0.972
SEL64510.1
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
  
  
 0.709
SEL78604.1
NRAMP (natural resistance-associated macrophage protein) metal ion transporters.
 
  
 0.694
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
    
 0.575
SEL76995.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
  
  
 0.566
SEM18911.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
  
  
 0.566
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
    
  0.543
SEM15858.1
Dihydrofolate synthase / folylpolyglutamate synthase.
    
  0.485
SEK74353.1
Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
     
 0.463
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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