STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK85625.1Dolichyl-phosphate-mannose-protein mannosyltransferase. (559 aa)    
Predicted Functional Partners:
SEK85668.1
Protein of unknown function.
       0.775
SEK85713.1
uroporphyrinogen-III synthase.
       0.771
SEL34737.1
4-amino-4-deoxy-L-arabinose transferase.
  
     0.688
SEL14783.1
Hypothetical protein.
 
 
  0.664
SEM28710.1
C-terminal domain of CHU protein family protein.
  
  
  0.652
SEK88659.1
Hypothetical protein.
  
     0.648
SEL92282.1
Uncharacterized conserved protein YegL, contains vWA domain of TerY type.
  
     0.640
SEL34792.1
Hypothetical protein.
 
    0.633
SEM08182.1
Hypothetical protein.
  
     0.619
SEK85592.1
Dolichol-phosphate mannosyltransferase.
 
 
  0.593
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.