STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK91547.1Protein of unknown function. (259 aa)    
Predicted Functional Partners:
SEK91504.1
Tryptophan 2,3-dioxygenase apoenzyme.
   
   0.857
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
       0.804
SEK91447.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
       0.773
SEL53419.1
Protein of unknown function.
  
     0.660
SEK98542.1
UDP-2,3-diacylglucosamine hydrolase.
  
     0.616
SEK82389.1
4-hydroxybenzoate polyprenyltransferase.
  
  
  0.601
SEK90816.1
Ig-like domain-containing protein.
 
    0.576
SEL49906.1
Beta-barrel assembly machine subunit BamA.
  
     0.571
SEL75586.1
Glycosyl transferases group 1.
  
 
  0.556
SEM22451.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
     0.550
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.