STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK93849.1Cysteine-rich secretory protein family protein. (172 aa)    
Predicted Functional Partners:
SEL52426.1
Allosteric NADP-dependent malic enzyme.
    
  0.594
nbaC
3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family.
       0.515
SEK93945.1
Putative membrane protein.
       0.515
SEK93798.1
Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain.
 
    
0.467
SEM22330.1
Beta-glucosidase.
  
 
  0.452
SEM05408.1
Hypothetical protein.
   
    0.445
SEM24431.1
Hypothetical protein.
   
    0.445
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
    
  0.440
SEK87349.1
Hypothetical protein.
  
     0.439
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.