STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK74227.1Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily. (853 aa)    
Predicted Functional Partners:
SEK74265.1
Uncharacterized conserved protein, DUF2126 family.
  
 0.976
SEK74188.1
Transglutaminase-like enzyme, putative cysteine protease.
 
  
 0.966
SEL75126.1
Uncharacterized conserved protein, Alpha-E superfamily.
 
    0.907
SEL75102.1
Transglutaminase-like enzyme, putative cysteine protease.
 
  
 0.857
SEL00485.1
Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
   
  0.808
SEL75155.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
 
   
0.663
SEK82305.1
Hypothetical protein.
 
     0.548
SEL00382.1
Hypothetical protein.
  
    0.507
SEK74310.1
Protein of unknown function.
       0.421
SEK51060.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
    
  0.408
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.