STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL33693.1L-threonylcarbamoyladenylate synthase; Belongs to the SUA5 family. (186 aa)    
Predicted Functional Partners:
tsaD
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.913
SEL51481.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB.
 
  
 0.851
SEL94861.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE.
 
  
 0.847
SEL33642.1
HDIG domain-containing protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
     
 0.830
SEL33612.1
Cytochrome c oxidase assembly protein subunit 15.
       0.801
SEL33574.1
pRiA4b ORF-3-like protein.
 
     0.789
SEL33739.1
Hypothetical protein.
       0.727
SEL33501.1
Hypothetical protein.
       0.559
SEL33782.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.540
SEK99297.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.499
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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