STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL35603.1acyl-CoA thioesterase-1. (246 aa)    
Predicted Functional Partners:
SEL35641.1
Putative ABC transport system ATP-binding protein.
 
     0.891
SEL35679.1
Putative ABC transport system permease protein.
 
     0.881
SEM05408.1
Hypothetical protein.
   
  0.631
SEM24431.1
Hypothetical protein.
   
  0.631
SEL55066.1
Protein of unknown function.
  
 0.587
SEK41009.1
3-hydroxyacyl-CoA dehydrogenase.
     
 0.542
SEM33059.1
Surface protein.
  
 
   0.428
SEM20975.1
Surface protein.
  
 
   0.420
SEL91780.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
   0.412
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.