STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL62757.1Hypothetical protein. (211 aa)    
Predicted Functional Partners:
SEL26378.1
Hypothetical protein.
  
     0.499
SEK28876.1
Hypothetical protein.
  
     0.480
SEK98890.1
Uncharacterized peroxidase-related enzyme.
  
     0.480
SEK28450.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.475
SEK37611.1
Hypothetical protein.
  
     0.475
SEK35523.1
Hypothetical protein.
  
     0.465
SEL97147.1
Hypothetical protein.
  
     0.448
SEL48805.1
Hypothetical protein.
  
     0.435
SEK31055.1
Iron complex outermembrane recepter protein.
  
     0.429
SEK49907.1
Peroxiredoxin.
  
     0.413
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.