STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL50914.1Type IX secretion system membrane protein, PorP/SprF family. (326 aa)    
Predicted Functional Partners:
SEL50866.1
Protein of unknown function.
 
     0.939
SEL50964.1
Gliding motility-associated C-terminal domain-containing protein.
 
     0.840
SEM24535.1
WD40-like Beta Propeller Repeat.
  
     0.769
SEK25861.1
WD40-like Beta Propeller Repeat.
  
     0.761
SEL83401.1
WD40-like Beta Propeller Repeat.
  
     0.758
SEL84887.1
Protein involved in gliding motility SprE.
  
     0.733
SEM15362.1
Protein involved in gliding motility GldJ.
 
     0.711
SEM08971.1
Protein of unknown function.
  
     0.705
SEK88746.1
Protein involved in gliding motility GldD.
  
     0.703
SEM08275.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.692
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.