STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL71923.1TupA-like ATPgrasp. (310 aa)    
Predicted Functional Partners:
SEL71888.1
Glycosyltransferase involved in cell wall bisynthesis.
     0.846
SEL71805.1
N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase.
     0.820
SEL71949.1
Hypothetical protein.
       0.776
SEL71767.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.750
SEL71856.1
Asparagine synthase (glutamine-hydrolysing).
  
 
  0.728
SEL72016.1
GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)- diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase.
     0.717
SEL20133.1
Sugar-transfer associated ATP-grasp.
 
     0.691
SEL72263.1
UDP-glucuronate 4-epimerase.
 
 
  0.632
SEL71981.1
Putative peptidoglycan lipid II flippase.
 
     0.600
SEL84756.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
  0.597
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.