STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL78060.1Protein of unknown function. (406 aa)    
Predicted Functional Partners:
SEL78104.1
Hypothetical protein.
 
     0.935
SEL77944.1
Hypothetical protein.
 
     0.902
SEL77984.1
Outer membrane receptor proteins, mostly Fe transport.
 
     0.897
SEL53788.1
Protein of unknown function.
  
     0.757
SEL78022.1
Protein of unknown function.
 
    
0.607
SEL78153.1
Magnesium chelatase family protein.
       0.547
SEK48949.1
Hypothetical protein.
  
     0.459
SEK84619.1
Outer membrane efflux protein.
  
     0.441
SEK88523.1
Putative auto-transporter adhesin, head GIN domain.
  
     0.429
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.