STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL86518.1Peptidase family M28. (589 aa)    
Predicted Functional Partners:
SEL86545.1
Zn-dependent amino-or carboxypeptidase, M28 family.
       0.773
SEL86568.1
Uncharacterized protein.
 
     0.769
SEL86435.1
Cupin domain-containing protein.
       0.576
SEL86477.1
Hypothetical protein.
       0.576
SEL86389.1
Protein of unknown function.
       0.541
SEL86604.1
Xaa-Pro aminopeptidase.
  
    0.514
SEL92930.1
Hypothetical protein.
  
     0.504
SEL86639.1
Exodeoxyribonuclease-3.
       0.495
SEK75155.1
Predicted oxidoreductase.
  
     0.460
SEK35421.1
Hypothetical protein.
  
     0.435
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.