STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL84316.1Hypothetical protein. (309 aa)    
Predicted Functional Partners:
SEL84285.1
Hypothetical protein.
 
     0.896
SEK85668.1
Protein of unknown function.
  
     0.773
SEM22667.1
Family of unknown function.
  
     0.767
SEL84887.1
Protein involved in gliding motility SprE.
  
     0.760
SEK85130.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.757
SEK83815.1
Hypothetical protein.
  
     0.756
SEK95709.1
Hypothetical protein.
  
     0.756
SEK43459.1
Protein of unknown function.
  
     0.755
SEK94513.1
Putative DNA-binding domain-containing protein.
  
     0.755
SEL75491.1
Putative MetA-pathway of phenol degradation.
  
     0.755
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.