STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL93574.1Hypothetical protein. (134 aa)    
Predicted Functional Partners:
SEK19175.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
     0.761
SEL95375.1
Hypothetical protein.
  
     0.705
SEK42023.1
Hypothetical protein.
 
     0.685
SEL75728.1
Hypothetical protein.
  
     0.675
SEK45042.1
Hypothetical protein.
  
     0.663
SEM08740.1
Hypothetical protein.
  
     0.658
SEK45329.1
Hypothetical protein.
  
     0.644
SEL75491.1
Putative MetA-pathway of phenol degradation.
  
     0.637
SEL94545.1
Hypothetical protein.
  
     0.630
SEL84756.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
  0.572
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.