STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM10789.1Protein of unknown function. (160 aa)    
Predicted Functional Partners:
SEK41009.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.732
SEK27586.1
NADPH2:quinone reductase.
  
 0.635
SEM19320.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
  
 0.612
SEK35421.1
Hypothetical protein.
    
  0.544
SEK45918.1
Diamine N-acetyltransferase.
    
  0.544
SEL22831.1
Protein N-acetyltransferase, RimJ/RimL family.
    
  0.544
SEL39187.1
Protein N-acetyltransferase, RimJ/RimL family.
    
  0.544
SEL76694.1
Protein N-acetyltransferase, RimJ/RimL family.
    
  0.544
SEL73951.1
Protein N-acetyltransferase, RimJ/RimL family.
    
  0.544
SEL87776.1
Ribosomal-protein-alanine N-acetyltransferase.
    
  0.544
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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