STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM19074.1Hypothetical protein. (264 aa)    
Predicted Functional Partners:
SEK80732.1
Hypothetical protein.
  
     0.690
SEK80807.1
Pyridine nucleotide-disulphide oxidoreductase.
  
     0.622
SEM19033.1
RNA methyltransferase, TrmH family.
       0.554
SEK81651.1
Hypothetical protein.
  
     0.538
SEL30044.1
Putative beta-barrel porin-2, OmpL-like. bbp2.
  
     0.534
SEM19107.1
Molybdopterin synthase sulfur carrier subunit.
       0.526
SEM19145.1
Molybdopterin synthase subunit MoaE.
       0.526
SEL21710.1
Beta-lactamase class A.
  
     0.521
SEL65962.1
Hypothetical protein.
  
     0.489
SEL21336.1
Pyruvate phosphate dikinase, PEP/pyruvate binding domain.
  
     0.479
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.