STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM19771.1Xanthine dehydrogenase accessory factor. (333 aa)    
Predicted Functional Partners:
SEM19543.1
Carbon monoxide dehydrogenase, medium subunit.
 
 
 0.962
SEM19736.1
Hypothetical protein.
 
     0.941
SEM19629.1
Carbon-monoxide dehydrogenase large subunit.
 
 
  0.904
SEM19584.1
Carbon-monoxide dehydrogenase small subunit.
 
 
  0.903
SEL92213.1
Molybdenum cofactor cytidylyltransferase.
 
 
 0.868
SEL03371.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 
 
  0.847
SEM19704.1
MoxR-like ATPase.
 
     0.839
SEL84756.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.838
SEL17148.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 
 
  0.834
SEM19663.1
Carbon monoxide dehydrogenase subunit G.
 
     0.825
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.