Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEM13410.1 | SEM14367.1 | SAMN04488008_1102 | SAMN04488008_11035 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Para-aminobenzoate synthetase component 1. | 0.900 |
| SEM13410.1 | SEM25643.1 | SAMN04488008_1102 | SAMN04488008_11338 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Anthranilate synthase component 1. | 0.964 |
| SEM13410.1 | SEM25674.1 | SAMN04488008_1102 | SAMN04488008_11339 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Anthranilate synthase component 2. | 0.976 |
| SEM13410.1 | aroC | SAMN04488008_1102 | SAMN04488008_101625 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.998 |
| SEM13410.1 | trpA | SAMN04488008_1102 | SAMN04488008_11344 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.561 |
| SEM13410.1 | trpB | SAMN04488008_1102 | SAMN04488008_11343 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.434 |
| SEM13410.1 | trpC | SAMN04488008_1102 | SAMN04488008_11341 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.727 |
| SEM13410.1 | trpD | SAMN04488008_1102 | SAMN04488008_11340 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.892 |
| SEM13410.1 | trpF | SAMN04488008_1102 | SAMN04488008_11342 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.539 |
| SEM13410.1 | trpF-2 | SAMN04488008_1102 | SAMN04488008_1168 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.539 |
| SEM14367.1 | SEM13410.1 | SAMN04488008_11035 | SAMN04488008_1102 | Para-aminobenzoate synthetase component 1. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.900 |
| SEM14367.1 | SEM25643.1 | SAMN04488008_11035 | SAMN04488008_11338 | Para-aminobenzoate synthetase component 1. | Anthranilate synthase component 1. | 0.848 |
| SEM14367.1 | SEM25674.1 | SAMN04488008_11035 | SAMN04488008_11339 | Para-aminobenzoate synthetase component 1. | Anthranilate synthase component 2. | 0.999 |
| SEM14367.1 | aroC | SAMN04488008_11035 | SAMN04488008_101625 | Para-aminobenzoate synthetase component 1. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.908 |
| SEM14367.1 | trpA | SAMN04488008_11035 | SAMN04488008_11344 | Para-aminobenzoate synthetase component 1. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.925 |
| SEM14367.1 | trpB | SAMN04488008_11035 | SAMN04488008_11343 | Para-aminobenzoate synthetase component 1. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.936 |
| SEM14367.1 | trpC | SAMN04488008_11035 | SAMN04488008_11341 | Para-aminobenzoate synthetase component 1. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.993 |
| SEM14367.1 | trpD | SAMN04488008_11035 | SAMN04488008_11340 | Para-aminobenzoate synthetase component 1. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.997 |
| SEM14367.1 | trpF | SAMN04488008_11035 | SAMN04488008_11342 | Para-aminobenzoate synthetase component 1. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.857 |
| SEM14367.1 | trpF-2 | SAMN04488008_11035 | SAMN04488008_1168 | Para-aminobenzoate synthetase component 1. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.859 |
page 1 of 6