STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ42687.1Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (286 aa)    
Predicted Functional Partners:
SHJ42658.1
Transcriptional regulator, TetR family.
 
     0.754
SHJ71203.1
Amino acid adenylation domain-containing protein.
  
 
 0.723
SHJ71269.1
Amino acid adenylation domain-containing protein.
   
 0.705
SHJ78800.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.675
SHK76714.1
Glutamate synthase (NADH) large subunit.
    
  0.651
SHJ85787.1
L-fucose dehydrogenase.
  
 
  0.599
SHJ86125.1
2-deoxy-D-gluconate 3-dehydrogenase.
  
 
  0.594
SHJ85408.1
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 
0.581
SHJ86343.1
Hypothetical protein; Belongs to the cytochrome P450 family.
  
 0.576
SHK23873.1
Predicted naringenin-chalcone synthase.
    
 0.518
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.