Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ43802.1 | SHJ43829.1 | SAMN04488007_0337 | SAMN04488007_0338 | Iron complex outermembrane recepter protein. | SusD family protein. | 0.936 |
SHJ43802.1 | SHJ43886.1 | SAMN04488007_0337 | SAMN04488007_0340 | Iron complex outermembrane recepter protein. | FG-GAP repeat-containing protein. | 0.628 |
SHJ43802.1 | SHJ43912.1 | SAMN04488007_0337 | SAMN04488007_0341 | Iron complex outermembrane recepter protein. | Repeat domain-containing protein. | 0.586 |
SHJ43802.1 | SHJ43959.1 | SAMN04488007_0337 | SAMN04488007_0343 | Iron complex outermembrane recepter protein. | Hypothetical protein. | 0.714 |
SHJ43829.1 | SHJ43802.1 | SAMN04488007_0338 | SAMN04488007_0337 | SusD family protein. | Iron complex outermembrane recepter protein. | 0.936 |
SHJ43829.1 | SHJ43886.1 | SAMN04488007_0338 | SAMN04488007_0340 | SusD family protein. | FG-GAP repeat-containing protein. | 0.735 |
SHJ43829.1 | SHJ43912.1 | SAMN04488007_0338 | SAMN04488007_0341 | SusD family protein. | Repeat domain-containing protein. | 0.706 |
SHJ43829.1 | SHJ43933.1 | SAMN04488007_0338 | SAMN04488007_0342 | SusD family protein. | PAP2 superfamily protein. | 0.567 |
SHJ43829.1 | SHJ43959.1 | SAMN04488007_0338 | SAMN04488007_0343 | SusD family protein. | Hypothetical protein. | 0.763 |
SHJ43886.1 | SHJ43802.1 | SAMN04488007_0340 | SAMN04488007_0337 | FG-GAP repeat-containing protein. | Iron complex outermembrane recepter protein. | 0.628 |
SHJ43886.1 | SHJ43829.1 | SAMN04488007_0340 | SAMN04488007_0338 | FG-GAP repeat-containing protein. | SusD family protein. | 0.735 |
SHJ43886.1 | SHJ43912.1 | SAMN04488007_0340 | SAMN04488007_0341 | FG-GAP repeat-containing protein. | Repeat domain-containing protein. | 0.813 |
SHJ43886.1 | SHJ43933.1 | SAMN04488007_0340 | SAMN04488007_0342 | FG-GAP repeat-containing protein. | PAP2 superfamily protein. | 0.948 |
SHJ43886.1 | SHJ43959.1 | SAMN04488007_0340 | SAMN04488007_0343 | FG-GAP repeat-containing protein. | Hypothetical protein. | 0.919 |
SHJ43886.1 | SHJ43989.1 | SAMN04488007_0340 | SAMN04488007_0344 | FG-GAP repeat-containing protein. | Hypothetical protein. | 0.709 |
SHJ43912.1 | SHJ43802.1 | SAMN04488007_0341 | SAMN04488007_0337 | Repeat domain-containing protein. | Iron complex outermembrane recepter protein. | 0.586 |
SHJ43912.1 | SHJ43829.1 | SAMN04488007_0341 | SAMN04488007_0338 | Repeat domain-containing protein. | SusD family protein. | 0.706 |
SHJ43912.1 | SHJ43886.1 | SAMN04488007_0341 | SAMN04488007_0340 | Repeat domain-containing protein. | FG-GAP repeat-containing protein. | 0.813 |
SHJ43912.1 | SHJ43933.1 | SAMN04488007_0341 | SAMN04488007_0342 | Repeat domain-containing protein. | PAP2 superfamily protein. | 0.948 |
SHJ43912.1 | SHJ43959.1 | SAMN04488007_0341 | SAMN04488007_0343 | Repeat domain-containing protein. | Hypothetical protein. | 0.920 |
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