STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ44415.1ATP-binding cassette, subfamily B, MsbA. (579 aa)    
Predicted Functional Partners:
SHK30763.1
ATP-binding cassette, subfamily B, MsbA.
  
  
 
0.939
SHJ46376.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain.
   
 
0.836
SHJ44438.1
Hypothetical protein; Manually curated.
       0.732
SHJ71203.1
Amino acid adenylation domain-containing protein.
  
 
 0.698
SHJ83848.1
ABC-type multidrug transport system, ATPase and permease component.
  
  
 
0.648
SHK56512.1
Adenylyltransferase and sulfurtransferase.
 
 0.609
SHJ63010.1
ABC-type multidrug transport system, ATPase component.
  
0.571
SHJ71269.1
Amino acid adenylation domain-containing protein.
  
 0.557
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.557
SHK23776.1
Acyl carrier protein.
  
 
 
 0.547
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.