STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ48182.1PAS domain S-box-containing protein. (743 aa)    
Predicted Functional Partners:
SHJ63670.1
Signal transduction histidine kinase.
 
 0.999
SHK16887.1
Hpt domain-containing protein.
 0.999
SHK28983.1
Type IV pili methyl-accepting chemotaxis transducer N-term.
  
 0.999
SHK79568.1
Signal transduction histidine kinase.
 0.999
SHJ88205.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 
 0.977
SHJ48216.1
Response regulator receiver domain-containing protein.
 
 0.975
SHJ87452.1
PAS domain S-box-containing protein.
 
 
0.967
SHK65733.1
Signal transduction histidine kinase.
 
 
 0.960
SHJ85679.1
Signal transduction histidine kinase.
 
 
 0.959
SHJ46748.1
Signal transduction histidine kinase.
 
 0.950
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.