STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ57726.1Uncharacterized conserved protein, conains N-terminal glutamine amidotransferase (GATase1)-like domain. (922 aa)    
Predicted Functional Partners:
SHK82969.1
Sortilin, neurotensin receptor 3.
  
     0.605
SHJ57690.1
PepSY-associated TM region.
 
     0.585
SHK19484.1
Hypothetical protein.
  
     0.539
SHK34048.1
Acylaminoacyl-peptidase.
  
     0.494
rlmF
23S rRNA m(6)A-1618 methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA.
       0.449
katG
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
       0.445
SHJ63608.1
Uncharacterized protein.
  
     0.429
SHJ68372.1
Uncharacterized protein.
  
     0.426
SHK30982.1
Aminobenzoyl-glutamate utilization protein B.
  
     0.411
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.