STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ70102.1Vitamin K-dependent gamma-carboxylase. (442 aa)    
Predicted Functional Partners:
SHJ70148.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
       0.820
SHJ70061.1
seryl-tRNA synthetase.
       0.605
SHJ70188.1
Por secretion system C-terminal sorting domain-containing protein.
  
    0.585
SHJ70225.1
Hypothetical protein.
       0.565
SHJ44016.1
Calcineurin-like phosphoesterase.
  
     0.425
SHJ87178.1
6-phosphofructokinase 2; Belongs to the carbohydrate kinase PfkB family.
   
    0.420
SHJ87632.1
Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.420
SHK68650.1
Hypothetical protein.
  
     0.414
SHJ69992.1
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit.
  
 
  0.401
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.