STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ70833.1O-antigen ligase. (402 aa)    
Predicted Functional Partners:
SHJ70801.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.737
SHJ70772.1
Hexapeptide repeat of succinyl-transferase.
       0.709
SHJ70859.1
Glycosyl transferase family 2.
  
  
 0.602
SHJ70901.1
Putative colanic acid biosynthesis acetyltransferase WcaB.
       0.552
SHJ70933.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.528
SHK59653.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
  
  
 0.513
SHJ70970.1
Capsular exopolysaccharide family.
  
  
 0.505
SHJ70744.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.462
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.