STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ71870.1Glycosyltransferase involved in cell wall bisynthesis. (389 aa)    
Predicted Functional Partners:
SHJ71963.1
Na+-driven multidrug efflux pump.
 
    0.878
SHJ71718.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.763
SHJ71938.1
Glycosyl transferases group 1.
 
    0.715
SHJ71908.1
Hypothetical protein.
       0.639
SHJ72004.1
Capsular exopolysaccharide family.
 
  
 0.582
SHK31306.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
  
 0.581
SHJ74129.1
Putative redox protein.
   
   0.546
SHJ71807.1
Colanic acid biosynthesis glycosyl transferase WcaI.
  
     0.543
SHK22782.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.522
SHK86004.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.482
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.