Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ41233.1 | SHJ75385.1 | SAMN04488007_0251 | SAMN04488007_1316 | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | Por secretion system C-terminal sorting domain-containing protein. | 0.479 |
SHJ46084.1 | SHJ75385.1 | SAMN04488007_0411 | SAMN04488007_1316 | Protein of unknown function. | Por secretion system C-terminal sorting domain-containing protein. | 0.479 |
SHJ56995.1 | SHJ75385.1 | SAMN04488007_0747 | SAMN04488007_1316 | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | Por secretion system C-terminal sorting domain-containing protein. | 0.479 |
SHJ64106.1 | SHJ75385.1 | SAMN04488007_0964 | SAMN04488007_1316 | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | Por secretion system C-terminal sorting domain-containing protein. | 0.479 |
SHJ75314.1 | SHJ75343.1 | SAMN04488007_1314 | SAMN04488007_1315 | Por secretion system C-terminal sorting domain-containing protein. | Hypothetical protein. | 0.542 |
SHJ75314.1 | SHJ75385.1 | SAMN04488007_1314 | SAMN04488007_1316 | Por secretion system C-terminal sorting domain-containing protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.542 |
SHJ75343.1 | SHJ75314.1 | SAMN04488007_1315 | SAMN04488007_1314 | Hypothetical protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.542 |
SHJ75343.1 | SHJ75385.1 | SAMN04488007_1315 | SAMN04488007_1316 | Hypothetical protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.773 |
SHJ75343.1 | polA | SAMN04488007_1315 | SAMN04488007_1317 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.513 |
SHJ75385.1 | SHJ41233.1 | SAMN04488007_1316 | SAMN04488007_0251 | Por secretion system C-terminal sorting domain-containing protein. | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | 0.479 |
SHJ75385.1 | SHJ46084.1 | SAMN04488007_1316 | SAMN04488007_0411 | Por secretion system C-terminal sorting domain-containing protein. | Protein of unknown function. | 0.479 |
SHJ75385.1 | SHJ56995.1 | SAMN04488007_1316 | SAMN04488007_0747 | Por secretion system C-terminal sorting domain-containing protein. | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | 0.479 |
SHJ75385.1 | SHJ64106.1 | SAMN04488007_1316 | SAMN04488007_0964 | Por secretion system C-terminal sorting domain-containing protein. | Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. | 0.479 |
SHJ75385.1 | SHJ75314.1 | SAMN04488007_1316 | SAMN04488007_1314 | Por secretion system C-terminal sorting domain-containing protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.542 |
SHJ75385.1 | SHJ75343.1 | SAMN04488007_1316 | SAMN04488007_1315 | Por secretion system C-terminal sorting domain-containing protein. | Hypothetical protein. | 0.773 |
SHJ75385.1 | SHK32205.1 | SAMN04488007_1316 | SAMN04488007_2743 | Por secretion system C-terminal sorting domain-containing protein. | C-terminal processing protease CtpA/Prc, contains a PDZ domain; Degrades oligopeptides; Belongs to the peptidase S41B family. | 0.492 |
SHJ75385.1 | SHK66007.1 | SAMN04488007_1316 | SAMN04488007_3554 | Por secretion system C-terminal sorting domain-containing protein. | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | 0.497 |
SHJ75385.1 | SHK79897.1 | SAMN04488007_1316 | SAMN04488007_3860 | Por secretion system C-terminal sorting domain-containing protein. | Aspartyl protease. | 0.508 |
SHJ75385.1 | polA | SAMN04488007_1316 | SAMN04488007_1317 | Por secretion system C-terminal sorting domain-containing protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.525 |
SHK32205.1 | SHJ75385.1 | SAMN04488007_2743 | SAMN04488007_1316 | C-terminal processing protease CtpA/Prc, contains a PDZ domain; Degrades oligopeptides; Belongs to the peptidase S41B family. | Por secretion system C-terminal sorting domain-containing protein. | 0.492 |
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