Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ63670.1 | SHJ80713.1 | SAMN04488007_0950 | SAMN04488007_1512 | Signal transduction histidine kinase. | Cyclohexadienyl dehydratase. | 0.547 |
SHJ63670.1 | SHJ88205.1 | SAMN04488007_0950 | SAMN04488007_1800 | Signal transduction histidine kinase. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.999 |
SHJ63670.1 | SHK16887.1 | SAMN04488007_0950 | SAMN04488007_2238 | Signal transduction histidine kinase. | Hpt domain-containing protein. | 0.999 |
SHJ80713.1 | SHJ63670.1 | SAMN04488007_1512 | SAMN04488007_0950 | Cyclohexadienyl dehydratase. | Signal transduction histidine kinase. | 0.547 |
SHJ80713.1 | SHJ80744.1 | SAMN04488007_1512 | SAMN04488007_1513 | Cyclohexadienyl dehydratase. | Hypothetical protein. | 0.768 |
SHJ80713.1 | SHJ80775.1 | SAMN04488007_1512 | SAMN04488007_1514 | Cyclohexadienyl dehydratase. | Alpha/beta hydrolase family protein. | 0.722 |
SHJ80713.1 | SHJ80800.1 | SAMN04488007_1512 | SAMN04488007_1515 | Cyclohexadienyl dehydratase. | Hypothetical protein. | 0.547 |
SHJ80713.1 | SHJ80829.1 | SAMN04488007_1512 | SAMN04488007_1516 | Cyclohexadienyl dehydratase. | Hypothetical protein. | 0.547 |
SHJ80713.1 | SHJ88205.1 | SAMN04488007_1512 | SAMN04488007_1800 | Cyclohexadienyl dehydratase. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.777 |
SHJ80713.1 | SHK16887.1 | SAMN04488007_1512 | SAMN04488007_2238 | Cyclohexadienyl dehydratase. | Hpt domain-containing protein. | 0.757 |
SHJ80713.1 | SHK45149.1 | SAMN04488007_1512 | SAMN04488007_3129 | Cyclohexadienyl dehydratase. | ABC-type branched-chain amino acid transport system, substrate-binding protein. | 0.604 |
SHJ80713.1 | SHK74090.1 | SAMN04488007_1512 | SAMN04488007_3733 | Cyclohexadienyl dehydratase. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.692 |
SHJ80713.1 | SHK74118.1 | SAMN04488007_1512 | SAMN04488007_3734 | Cyclohexadienyl dehydratase. | Prephenate dehydrogenase. | 0.556 |
SHJ80744.1 | SHJ80713.1 | SAMN04488007_1513 | SAMN04488007_1512 | Hypothetical protein. | Cyclohexadienyl dehydratase. | 0.768 |
SHJ80744.1 | SHJ80775.1 | SAMN04488007_1513 | SAMN04488007_1514 | Hypothetical protein. | Alpha/beta hydrolase family protein. | 0.757 |
SHJ80744.1 | SHJ80800.1 | SAMN04488007_1513 | SAMN04488007_1515 | Hypothetical protein. | Hypothetical protein. | 0.646 |
SHJ80744.1 | SHJ80829.1 | SAMN04488007_1513 | SAMN04488007_1516 | Hypothetical protein. | Hypothetical protein. | 0.562 |
SHJ80775.1 | SHJ80713.1 | SAMN04488007_1514 | SAMN04488007_1512 | Alpha/beta hydrolase family protein. | Cyclohexadienyl dehydratase. | 0.722 |
SHJ80775.1 | SHJ80744.1 | SAMN04488007_1514 | SAMN04488007_1513 | Alpha/beta hydrolase family protein. | Hypothetical protein. | 0.757 |
SHJ80775.1 | SHJ80800.1 | SAMN04488007_1514 | SAMN04488007_1515 | Alpha/beta hydrolase family protein. | Hypothetical protein. | 0.675 |
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