STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ80876.1Hypothetical protein. (300 aa)    
Predicted Functional Partners:
SHJ89007.1
Hypothetical protein.
  
     0.679
SHJ80906.1
Methyltransferase domain-containing protein.
       0.670
SHK24838.1
Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains.
  
     0.592
SHJ34427.1
Phenylalanine-4-hydroxylase.
  
     0.566
SHJ95749.1
Hypothetical protein.
  
     0.542
SHJ44326.1
Hypothetical protein.
  
     0.515
SHJ80916.1
Hypothetical protein.
       0.483
SHJ41570.1
Hypothetical protein.
  
     0.446
SHK43509.1
Hypothetical protein.
  
     0.438
SHJ46249.1
Hypothetical protein.
  
     0.436
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.