Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ87068.1 | SHJ87097.1 | SAMN04488007_1757 | SAMN04488007_1758 | Putative zinc ribbon domain-containing protein. | Hypothetical protein. | 0.553 |
SHJ87068.1 | SHJ87120.1 | SAMN04488007_1757 | SAMN04488007_1759 | Putative zinc ribbon domain-containing protein. | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.553 |
SHJ87068.1 | SHJ87148.1 | SAMN04488007_1757 | SAMN04488007_1760 | Putative zinc ribbon domain-containing protein. | Uncharacterized conserved protein, DUF302 family. | 0.553 |
SHJ87068.1 | SHJ87178.1 | SAMN04488007_1757 | SAMN04488007_1761 | Putative zinc ribbon domain-containing protein. | 6-phosphofructokinase 2; Belongs to the carbohydrate kinase PfkB family. | 0.572 |
SHJ87068.1 | SHJ87209.1 | SAMN04488007_1757 | SAMN04488007_1762 | Putative zinc ribbon domain-containing protein. | Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family. | 0.472 |
SHJ87097.1 | SHJ87068.1 | SAMN04488007_1758 | SAMN04488007_1757 | Hypothetical protein. | Putative zinc ribbon domain-containing protein. | 0.553 |
SHJ87097.1 | SHJ87120.1 | SAMN04488007_1758 | SAMN04488007_1759 | Hypothetical protein. | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.775 |
SHJ87097.1 | SHJ87148.1 | SAMN04488007_1758 | SAMN04488007_1760 | Hypothetical protein. | Uncharacterized conserved protein, DUF302 family. | 0.775 |
SHJ87097.1 | SHJ87178.1 | SAMN04488007_1758 | SAMN04488007_1761 | Hypothetical protein. | 6-phosphofructokinase 2; Belongs to the carbohydrate kinase PfkB family. | 0.686 |
SHJ87097.1 | SHJ87209.1 | SAMN04488007_1758 | SAMN04488007_1762 | Hypothetical protein. | Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family. | 0.483 |
SHJ87120.1 | SHJ87068.1 | SAMN04488007_1759 | SAMN04488007_1757 | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Putative zinc ribbon domain-containing protein. | 0.553 |
SHJ87120.1 | SHJ87097.1 | SAMN04488007_1759 | SAMN04488007_1758 | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Hypothetical protein. | 0.775 |
SHJ87120.1 | SHJ87148.1 | SAMN04488007_1759 | SAMN04488007_1760 | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Uncharacterized conserved protein, DUF302 family. | 0.782 |
SHJ87120.1 | SHJ87178.1 | SAMN04488007_1759 | SAMN04488007_1761 | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 6-phosphofructokinase 2; Belongs to the carbohydrate kinase PfkB family. | 0.688 |
SHJ87120.1 | SHJ87209.1 | SAMN04488007_1759 | SAMN04488007_1762 | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family. | 0.491 |
SHJ87148.1 | SHJ87068.1 | SAMN04488007_1760 | SAMN04488007_1757 | Uncharacterized conserved protein, DUF302 family. | Putative zinc ribbon domain-containing protein. | 0.553 |
SHJ87148.1 | SHJ87097.1 | SAMN04488007_1760 | SAMN04488007_1758 | Uncharacterized conserved protein, DUF302 family. | Hypothetical protein. | 0.775 |
SHJ87148.1 | SHJ87120.1 | SAMN04488007_1760 | SAMN04488007_1759 | Uncharacterized conserved protein, DUF302 family. | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.782 |
SHJ87148.1 | SHJ87178.1 | SAMN04488007_1760 | SAMN04488007_1761 | Uncharacterized conserved protein, DUF302 family. | 6-phosphofructokinase 2; Belongs to the carbohydrate kinase PfkB family. | 0.686 |
SHJ87148.1 | SHJ87209.1 | SAMN04488007_1760 | SAMN04488007_1762 | Uncharacterized conserved protein, DUF302 family. | Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family. | 0.543 |
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