STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ88656.1phospholipid/cholesterol/gamma-HCH transport system permease protein; Belongs to the MlaE permease family. (267 aa)    
Predicted Functional Partners:
SHJ88637.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 0.999
SHJ88617.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.998
SHK75832.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 0.984
SHK58587.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.969
SHK75796.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
  
 
0.881
SHJ92831.1
Lipopolysaccharide export system ATP-binding protein.
 
  
  0.547
SHJ44415.1
ATP-binding cassette, subfamily B, MsbA.
   
   0.512
SHJ83848.1
ABC-type multidrug transport system, ATPase and permease component.
   
   0.512
SHJ89964.1
ATP-binding cassette, subfamily B.
   
   0.512
SHK30763.1
ATP-binding cassette, subfamily B, MsbA.
   
   0.512
Your Current Organism:
Maribacter aquivivus
NCBI taxonomy Id: 228958
Other names: Bacteroidetes bacterium KMM 3949, CCUG 48009, DSM 16478, KCTC 12968, KMM 3949, M. aquivivus, Maribacter aquivivus Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.