Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ48216.1 | SHJ63670.1 | SAMN04488007_0475 | SAMN04488007_0950 | Response regulator receiver domain-containing protein. | Signal transduction histidine kinase. | 0.513 |
SHJ48216.1 | SHJ87452.1 | SAMN04488007_0475 | SAMN04488007_1771 | Response regulator receiver domain-containing protein. | PAS domain S-box-containing protein. | 0.932 |
SHJ48216.1 | SHJ88205.1 | SAMN04488007_0475 | SAMN04488007_1800 | Response regulator receiver domain-containing protein. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.983 |
SHJ48216.1 | SHJ91242.1 | SAMN04488007_0475 | SAMN04488007_1921 | Response regulator receiver domain-containing protein. | PAS fold-containing protein. | 0.766 |
SHJ48216.1 | SHK16887.1 | SAMN04488007_0475 | SAMN04488007_2238 | Response regulator receiver domain-containing protein. | Hpt domain-containing protein. | 0.852 |
SHJ48216.1 | SHK28983.1 | SAMN04488007_0475 | SAMN04488007_2639 | Response regulator receiver domain-containing protein. | Type IV pili methyl-accepting chemotaxis transducer N-term. | 0.408 |
SHJ48216.1 | SHK34807.1 | SAMN04488007_0475 | SAMN04488007_2814 | Response regulator receiver domain-containing protein. | Signal transduction histidine kinase. | 0.738 |
SHJ48216.1 | SHK79568.1 | SAMN04488007_0475 | SAMN04488007_3851 | Response regulator receiver domain-containing protein. | Signal transduction histidine kinase. | 0.537 |
SHJ48216.1 | SHK80574.1 | SAMN04488007_0475 | SAMN04488007_3880 | Response regulator receiver domain-containing protein. | PAS domain S-box-containing protein. | 0.952 |
SHJ63670.1 | SHJ48216.1 | SAMN04488007_0950 | SAMN04488007_0475 | Signal transduction histidine kinase. | Response regulator receiver domain-containing protein. | 0.513 |
SHJ63670.1 | SHJ87452.1 | SAMN04488007_0950 | SAMN04488007_1771 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SHJ63670.1 | SHJ88205.1 | SAMN04488007_0950 | SAMN04488007_1800 | Signal transduction histidine kinase. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.999 |
SHJ63670.1 | SHJ91242.1 | SAMN04488007_0950 | SAMN04488007_1921 | Signal transduction histidine kinase. | PAS fold-containing protein. | 0.799 |
SHJ63670.1 | SHJ91262.1 | SAMN04488007_0950 | SAMN04488007_1922 | Signal transduction histidine kinase. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.596 |
SHJ63670.1 | SHK16887.1 | SAMN04488007_0950 | SAMN04488007_2238 | Signal transduction histidine kinase. | Hpt domain-containing protein. | 0.999 |
SHJ63670.1 | SHK28983.1 | SAMN04488007_0950 | SAMN04488007_2639 | Signal transduction histidine kinase. | Type IV pili methyl-accepting chemotaxis transducer N-term. | 0.925 |
SHJ63670.1 | SHK34807.1 | SAMN04488007_0950 | SAMN04488007_2814 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SHJ63670.1 | SHK79568.1 | SAMN04488007_0950 | SAMN04488007_3851 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.930 |
SHJ63670.1 | SHK80574.1 | SAMN04488007_0950 | SAMN04488007_3880 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SHJ87452.1 | SHJ48216.1 | SAMN04488007_1771 | SAMN04488007_0475 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.932 |
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